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» Framework for a Protein Ontology
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ECAI
2010
Springer
13 years 10 months ago
Metric Propositional Neighborhood Logics: Expressiveness, Decidability, and Undecidability
Abstract. Interval temporal logics formalize reasoning about interval structures over (usually) linearly ordered domains, where time intervals are the primitive ontological entitie...
Davide Bresolin, Dario Della Monica, Valentin Gora...
GISCIENCE
2010
Springer
216views GIS» more  GISCIENCE 2010»
13 years 10 months ago
Cognitive Invariants of Geographic Event Conceptualization: What Matters and What Refines?
Behavioral experiments addressing the conceptualization of geographic events are few and far between. Our research seeks to address this deficiency by developing an experimental fr...
Alexander Klippel, Rui Li, Frank Hardisty, Chris W...
BMCBI
2010
155views more  BMCBI 2010»
13 years 9 months ago
FunctSNP: an R package to link SNPs to functional knowledge and dbAutoMaker: a suite of Perl scripts to build SNP databases
Background: Whole genome association studies using highly dense single nucleotide polymorphisms (SNPs) are a set of methods to identify DNA markers associated with variation in a ...
Stephen J. Goodswen, Cedric Gondro, Nathan S. Wats...
BMCBI
2010
115views more  BMCBI 2010»
13 years 9 months ago
Multiconstrained gene clustering based on generalized projections
Background: Gene clustering for annotating gene functions is one of the fundamental issues in bioinformatics. The best clustering solution is often regularized by multiple constra...
Jia Zeng, Shanfeng Zhu, Alan Wee-Chung Liew, Hong ...
BMCBI
2010
144views more  BMCBI 2010»
13 years 9 months ago
Identifying overrepresented concepts in gene lists from literature: a statistical approach based on Poisson mixture model
Background: Large-scale genomic studies often identify large gene lists, for example, the genes sharing the same expression patterns. The interpretation of these gene lists is gen...
Xin He, Moushumi Sen Sarma, Xu Ling, Brant W. Chee...