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» Free energy computation by controlled Langevin dynamics
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JCC
2011
105views more  JCC 2011»
13 years 2 months ago
Wordom: A user-friendly program for the analysis of molecular structures, trajectories, and free energy surfaces
Abstract: Wordom is a versatile, user-friendly, and efficient program for manipulation and analysis of molecular structures and dynamics. The following new analysis modules have b...
Michele Seeber, Angelo Felline, Francesco Raimondi...
BMCBI
2006
158views more  BMCBI 2006»
13 years 7 months ago
Detection of non-coding RNAs on the basis of predicted secondary structure formation free energy change
Background: Non-coding RNAs (ncRNAs) have a multitude of roles in the cell, many of which remain to be discovered. However, it is difficult to detect novel ncRNAs in biochemical s...
Andrew V. Uzilov, Joshua M. Keegan, David H. Mathe...
ICDCS
2009
IEEE
14 years 4 months ago
CLIQUE: Role-Free Clustering with Q-Learning for Wireless Sensor Networks
Clustering and aggregation inherently increase wireless sensor network (WSN) lifetime by collecting information within a cluster at a cluster head, reducing the amount of data thr...
Anna Förster, Amy L. Murphy
EUC
2008
Springer
13 years 9 months ago
A Generalized Framework for System-Wide Energy Savings in Hard Real-Time Embedded Systems
A generalized dynamic energy performance scaling (DEPS) framework is proposed for exploring applicationspecific energy-saving potential in hard real-time embedded systems. This so...
Gang Zeng, Hiroyuki Tomiyama, Hiroaki Takada, Tohr...
ICPP
2003
IEEE
14 years 17 days ago
Dynamic Control Frames in Reservation-Based Packet Scheduling for Single-Hop WDM Networks
In reservation-based packet scheduling algorithms for single-hop WDM networks, one of the wavelengths is used as a control channel which is shared by all of the nodes for transmit...
Hwa-Chun Lin, Pei-Shin Liu