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CIKM
2008
Springer
13 years 9 months ago
On effective presentation of graph patterns: a structural representative approach
In the past, quite a few fast algorithms have been developed to mine frequent patterns over graph data, with the large spectrum covering many variants of the problem. However, the...
Chen Chen, Cindy Xide Lin, Xifeng Yan, Jiawei Han
FAST
2009
13 years 5 months ago
HYDRAstor: A Scalable Secondary Storage
HYDRAstor is a scalable, secondary storage solution aimed at the enterprise market. The system consists of a back-end architectured as a grid of storage nodes built around a distr...
Cezary Dubnicki, Leszek Gryz, Lukasz Heldt, Michal...
ISMB
2007
13 years 10 months ago
A Chado case study: an ontology-based modular schema for representing genome-associated biological information
Motivation: A few years ago, FlyBase undertook to design a new database schema to store Drosophila data. It would fully integrate genomic sequence and annotation data with bibliog...
Chris Mungall, David B. Emmert
CONSTRAINTS
2008
182views more  CONSTRAINTS 2008»
13 years 7 months ago
Constraint Programming in Structural Bioinformatics
Bioinformatics aims at applying computer science methods to the wealth of data collected in a variety of experiments in life sciences (e.g. cell and molecular biology, biochemistry...
Pedro Barahona, Ludwig Krippahl
CSB
2003
IEEE
130views Bioinformatics» more  CSB 2003»
14 years 29 days ago
A Computational Approach to Reconstructing Gene Regulatory Networks
Reverse-engineering of gene networks using linear models often results in an underdetermined system because of excessive unknown parameters. In addition, the practical utility of ...
Xutao Deng, Hesham H. Ali