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BMCBI
2006
166views more  BMCBI 2006»
13 years 10 months ago
Extraction of phylogenetic network modules from the metabolic network
Background: In bio-systems, genes, proteins and compounds are related to each other, thus forming complex networks. Although each organism has its individual network, some organis...
Takuji Yamada, Minoru Kanehisa, Susumu Goto
IR
2010
13 years 8 months ago
Gradient descent optimization of smoothed information retrieval metrics
Abstract Most ranking algorithms are based on the optimization of some loss functions, such as the pairwise loss. However, these loss functions are often different from the criter...
Olivier Chapelle, Mingrui Wu
BMCBI
2006
146views more  BMCBI 2006»
13 years 10 months ago
GeneTools - application for functional annotation and statistical hypothesis testing
Background: Modern biology has shifted from "one gene" approaches to methods for genomic-scale analysis like microarray technology, which allow simultaneous measurement ...
Vidar Beisvag, Frode K. R. Jünge, Hallgeir Be...
FLAIRS
2008
14 years 16 days ago
Complementary Analysis of High-Order Association Patterns and Classification
To facilitate more meaningful interpretation considering the internal interdependency relationships between data values, a new form of high-order (multiple-valued) pattern known a...
Thomas W. H. Lui, David K. Y. Chiu
BMCBI
2005
122views more  BMCBI 2005»
13 years 10 months ago
FACT - a framework for the functional interpretation of high-throughput experiments
Background: Interpreting the results of high-throughput experiments, such as those obtained from DNA-microarrays, is an often time-consuming task due to the high number of data-po...
Felix Kokocinski, Nicolas Delhomme, Gunnar Wrobel,...