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BMCBI
2004
200views more  BMCBI 2004»
13 years 7 months ago
ABC: software for interactive browsing of genomic multiple sequence alignment data
Background: Alignment and comparison of related genome sequences is a powerful method to identify regions likely to contain functional elements. Such analyses are data intensive, ...
Gregory M. Cooper, Senthil A. G. Singaravelu, Aren...
CSB
2003
IEEE
14 years 24 days ago
Search for Evolution-Related-Oligonucleotides and Conservative Words in rRNA Sequences
We describe a method for finding ungapped conserved words in rRNA sequences that is effective, utilizes evolutionary information and does not depend on multiple sequence alignment...
Liaofu Luo, Li-Ching Hsieh, Fengmin Ji, Mengwen Ji...
WADS
1997
Springer
88views Algorithms» more  WADS 1997»
13 years 11 months ago
Finding Cores of Limited Length
In this paper we consider the problem of nding a core of limited length in a tree. A core is a path, which minimizes the sum of the distances to all nodes in the tree. This proble...
Stephen Alstrup, Peter W. Lauridsen, Peer Sommerlu...
IJCAI
2007
13 years 9 months ago
Automated Design of Multistage Mechanisms
Mechanism design is the study of preference aggregation protocols that work well in the face of self-interested agents. We present the first general-purpose techniques for automa...
Tuomas Sandholm, Vincent Conitzer, Craig Boutilier
KDD
2004
ACM
126views Data Mining» more  KDD 2004»
14 years 8 months ago
Turning CARTwheels: an alternating algorithm for mining redescriptions
We present an unusual algorithm involving classification trees-CARTwheels--where two trees are grown in opposite directions so that they are joined at their leaves. This approach ...
Naren Ramakrishnan, Deept Kumar, Bud Mishra, Malco...