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BMCBI
2008
125views more  BMCBI 2008»
13 years 7 months ago
XplorSeq: A software environment for integrated management and phylogenetic analysis of metagenomic sequence data
Background: Advances in automated DNA sequencing technology have accelerated the generation of metagenomic DNA sequences, especially environmental ribosomal RNA gene (rDNA) sequen...
Daniel N. Frank
BMCBI
2008
142views more  BMCBI 2008»
13 years 7 months ago
Strategies for measuring evolutionary conservation of RNA secondary structures
Background: Evolutionary conservation of RNA secondary structure is a typical feature of many functional non-coding RNAs. Since almost all of the available methods used for predic...
Andreas R. Gruber, Stephan H. F. Bernhart, Ivo L. ...
MEMBRANE
2009
Springer
14 years 2 months ago
A Look Back at Some Early Results in Membrane Computing
em is a computing model, which abstracts from the way the living cells process chemical compounds in their compartmental structure. The regions defined by a membrane structure con...
Oscar H. Ibarra
BMCBI
2008
153views more  BMCBI 2008»
13 years 7 months ago
Version VI of the ESTree db: an improved tool for peach transcriptome analysis
Background: The ESTree database (db) is a collection of Prunus persica and Prunus dulcis EST sequences that in its current version encompasses 75,404 sequences from 3 almond and 1...
Barbara Lazzari, Andrea Caprera, Alberto Vecchiett...
SPAA
2006
ACM
14 years 1 months ago
Playing push vs pull: models and algorithms for disseminating dynamic data in networks
Consider a network in which a collection of source nodes maintain and periodically update data objects for a collection of sink nodes, each of which periodically accesses the data...
R. C. Chakinala, Abishek Kumarasubramanian, Kofi A...