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DNA
2006
Springer
130views Bioinformatics» more  DNA 2006»
14 years 3 days ago
Displacement Whiplash PCR: Optimized Architecture and Experimental Validation
Whiplash PCR-based methods of biomolecular computation (BMC), while highly-versatile in principle, are well-known to suffer from a simple but serious form of self-poisoning known a...
John A. Rose, Ken Komiya, Satsuki Yaegashi, Masami...
BIBE
2007
IEEE
136views Bioinformatics» more  BIBE 2007»
13 years 12 months ago
A Two-Stage Gene Selection Algorithm by Combining ReliefF and mRMR
Abstract—Gene expression data usually contains a large number of genes, but a small number of samples. Feature selection for gene expression data aims at finding a set of genes ...
Yi Zhang, Chris H. Q. Ding, Tao Li
BIBE
2007
IEEE
151views Bioinformatics» more  BIBE 2007»
13 years 12 months ago
On the Effectiveness of Constraints Sets in Clustering Genes
—In this paper, we have modified a constrained clustering algorithm to perform exploratory analysis on gene expression data using prior knowledge presented in the form of constr...
Erliang Zeng, Chengyong Yang, Tao Li, Giri Narasim...
CORR
2010
Springer
189views Education» more  CORR 2010»
13 years 8 months ago
Robust PCA via Outlier Pursuit
Singular Value Decomposition (and Principal Component Analysis) is one of the most widely used techniques for dimensionality reduction: successful and efficiently computable, it ...
Huan Xu, Constantine Caramanis, Sujay Sanghavi
WABI
2010
Springer
168views Bioinformatics» more  WABI 2010»
13 years 8 months ago
The Complexity of Inferring a Minimally Resolved Phylogenetic Supertree
Abstract. A recursive algorithm by Aho, Sagiv, Szymanski, and Ullman [1] forms the basis for many modern rooted supertree methods employed in Phylogenetics. However, as observed by...
Jesper Jansson, Richard S. Lemence, Andrzej Lingas