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WABI
2009
Springer
14 years 4 months ago
MADMX: A Novel Strategy for Maximal Dense Motif Extraction
We develop, analyze and experiment with a new tool, called madmx, which extracts frequent motifs, possibly including don’t care characters, from biological sequences. We introduc...
Roberto Grossi, Andrea Pietracaprina, Nadia Pisant...
WABI
2009
Springer
130views Bioinformatics» more  WABI 2009»
14 years 4 months ago
Linear-Time Protein 3-D Structure Searching with Insertions and Deletions
It becomes more and more important to search for similar structures from molecular 3-D structure databases in the structural biology of the post genomic era. Two molecules are said...
Tetsuo Shibuya, Jesper Jansson, Kunihiko Sadakane
WABI
2009
Springer
162views Bioinformatics» more  WABI 2009»
14 years 4 months ago
Aligning Biomolecular Networks Using Modular Graph Kernels
Comparative analysis of biomolecular networks constructed using measurements from different conditions, tissues, and organisms offer a powerful approach to understanding the stru...
Fadi Towfic, M. Heather West Greenlee, Vasant Hona...
ICDM
2008
IEEE
136views Data Mining» more  ICDM 2008»
14 years 4 months ago
Generalized Framework for Syntax-Based Relation Mining
Supervised approaches to Data Mining are particularly appealing as they allow for the extraction of complex relations from data objects. In order to facilitate their application i...
Bonaventura Coppola, Alessandro Moschitti, Daniele...
COREGRID
2007
Springer
14 years 3 months ago
Simplifying Grid Application Programming Using Web-Enabled Code Transfer Tools
This paper deals with one of the fundamental properties of grid computing – transferring code between grid nodes and executing it remotely on heterogeneous hosts. Contemporary mi...
Catalin Dumitrescu, Jan Dünnweber, Philipp L&...