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GRID
2000
Springer
14 years 1 months ago
Data Management in an International Data Grid Project
Abstract. In this paper we report on preliminary work and architectural design carried out in the "Data Management" work package in the International Data Grid project. O...
Wolfgang Hoschek, Francisco Javier Jaén-Mar...
ISMB
2007
13 years 12 months ago
Computational prediction of host-pathogen protein-protein interactions
Our major effort in this reporting period comprised functional genomic studies of key genes for carbon metabolite and nodulation/nitrogen fixation in Sinorhizobium meliloti, compar...
Matthew D. Dyer, T. M. Murali, Bruno W. S. Sobral
ACMSE
2005
ACM
13 years 11 months ago
An algorithm for baseline correction of MALDI mass spectra
Visualization and differentiation of proteins in tissue are problems of increasing interest in computational systems biology, bioinformatics, and image processing. A platform for ...
Betsy Williams, Shannon Cornett, Benoit M. Dawant,...
FPL
2008
Springer
150views Hardware» more  FPL 2008»
13 years 11 months ago
Compiler generated systolic arrays for wavefront algorithm acceleration on FPGAs
Wavefront algorithms, such as the Smith-Waterman algorithm, are commonly used in bioinformatics for exact local and global sequence alignment. These algorithms are highly computat...
Betul Buyukkurt, Walid A. Najjar
SDM
2008
SIAM
139views Data Mining» more  SDM 2008»
13 years 11 months ago
Maximal Quasi-Bicliques with Balanced Noise Tolerance: Concepts and Co-clustering Applications
The rigid all-versus-all adjacency required by a maximal biclique for its two vertex sets is extremely vulnerable to missing data. In the past, several types of quasi-bicliques ha...
Jinyan Li, Kelvin Sim, Guimei Liu, Limsoon Wong