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SCFBM
2008
148views more  SCFBM 2008»
13 years 7 months ago
Flow: Statistics, visualization and informatics for flow cytometry
Flow is an open source software application for clinical and experimental researchers to perform exploratory data analysis, clustering and annotation of flow cytometric data. Flow...
Jacob Frelinger, Thomas B. Kepler, Cliburn Chan
SMA
2009
ACM
185views Solid Modeling» more  SMA 2009»
14 years 2 months ago
A dynamic data structure for flexible molecular maintenance and informatics
We present the “Dynamic Packing Grid” (DPG) data structure along with details of our implementation and performance results, for maintaining and manipulating flexible molecul...
Chandrajit L. Bajaj, Rezaul Alam Chowdhury, Muhibu...
BIOINFORMATICS
2010
250views more  BIOINFORMATICS 2010»
13 years 6 months ago
DEGseq: an R package for identifying differentially expressed genes from RNA-seq data
Summary: High-throughput RNA sequencing (RNA-seq) is rapidly emerging as a major quantitative transcriptome profiling platform. Here we present DEGseq, an R package to identify di...
Likun Wang, Zhixing Feng, Xi Wang, Xiaowo Wang, Xu...
BIOINFORMATICS
2008
135views more  BIOINFORMATICS 2008»
13 years 7 months ago
Message-passing algorithms for the prediction of protein domain interactions from protein-protein interaction data
Motivation: Cellular processes often hinge upon specific interactions among proteins, and knowledge of these processes at a system level constitutes a major goal of proteomics. In...
Mudassar Iqbal, Alex Alves Freitas, Colin G. Johns...