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WEA
2005
Springer
176views Algorithms» more  WEA 2005»
14 years 1 months ago
High-Performance Algorithm Engineering for Large-Scale Graph Problems and Computational Biology
Abstract. Many large-scale optimization problems rely on graph theoretic solutions; yet high-performance computing has traditionally focused on regular applications with high degre...
David A. Bader
CSB
2003
IEEE
176views Bioinformatics» more  CSB 2003»
14 years 28 days ago
3D Structural Homology Detection via Unassigned Residual Dipolar Couplings
Recognition of a protein’s fold provides valuable information about its function. While many sequence-based homology prediction methods exist, an important challenge remains: tw...
Christopher James Langmead, Bruce Randall Donald
DMKD
2003
ACM
148views Data Mining» more  DMKD 2003»
14 years 27 days ago
A symbolic representation of time series, with implications for streaming algorithms
The parallel explosions of interest in streaming data, and data mining of time series have had surprisingly little intersection. This is in spite of the fact that time series data...
Jessica Lin, Eamonn J. Keogh, Stefano Lonardi, Bil...
SIGMOD
2010
ACM
231views Database» more  SIGMOD 2010»
14 years 13 days ago
Automatically incorporating new sources in keyword search-based data integration
Scientific data offers some of the most interesting challenges in data integration today. Scientific fields evolve rapidly and accumulate masses of observational and experiment...
Partha Pratim Talukdar, Zachary G. Ives, Fernando ...
AB
2007
Springer
13 years 11 months ago
Efficient Haplotype Inference with Pseudo-boolean Optimization
Abstract. Haplotype inference from genotype data is a key computational problem in bioinformatics, since retrieving directly haplotype information from DNA samples is not feasible ...
Ana Graça, João Marques-Silva, In&ec...