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VLDB
2005
ACM
152views Database» more  VLDB 2005»
14 years 7 months ago
Composing, optimizing, and executing plans for bioinformatics web services
The emergence of a large number of bioinformatics datasets on the Internet has resulted in the need for flexible and efficient approaches to integrate information from multiple bio...
Snehal Thakkar, José Luis Ambite, Craig A. Knoblo...
JCSS
2007
116views more  JCSS 2007»
13 years 7 months ago
The most probable annotation problem in HMMs and its application to bioinformatics
Hidden Markov models (HMMs) are often used for biological sequence annotation. Each sequence feature is represented by a collection of states with the same label. In annotating a ...
Brona Brejová, Daniel G. Brown 0001, Tom&aa...
BMCBI
2010
149views more  BMCBI 2010»
13 years 7 months ago
S3DB core: a framework for RDF generation and management in bioinformatics infrastructures
Background: Biomedical research is set to greatly benefit from the use of semantic web technologies in the design of computational infrastructure. However, beyond well defined res...
Jonas S. Almeida, Helena F. Deus, Wolfgang Maass
CSEE
2009
Springer
14 years 2 months ago
Software Engineering Education for Bioinformatics
As software engineering educators, it is important for us to realize the increasing domainspecificity of software, and incorporate these changes in our design of teaching material...
Medha Umarji, Carolyn B. Seaman, Akif Günes K...
GCC
2006
Springer
13 years 11 months ago
UGE4B: An Universal Grid Environment for Bioinformatics Research
Recent years, grid technology has been used widely in the fields of scientific research. In this paper, we present an universal grid environment for Bioinformatics Research (UGE4B...
Gang Chen, Yongwei Wu, Weimin Zheng