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» Function Sequence Genetic Programming
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PLDI
2004
ACM
14 years 1 months ago
Fast searches for effective optimization phase sequences
It has long been known that a fixed ordering of optimization phases will not produce the best code for every application. One approach for addressing this phase ordering problem ...
Prasad Kulkarni, Stephen Hines, Jason Hiser, David...
ICGA
1997
126views Optimization» more  ICGA 1997»
13 years 9 months ago
Evolution of Graph-Like Programs with Parallel Distributed Genetic Programming
Parallel Distributed Genetic Programming (PDGP) is a new form of Genetic Programming (GP) suitable for the development of programs with a high degree of parallelism. Programs are ...
Riccardo Poli
BMCBI
2006
102views more  BMCBI 2006»
13 years 7 months ago
UVPAR: fast detection of functional shifts in duplicate genes
Background: The imprint of natural selection on gene sequences is often difficult to detect. A plethora of methods have been devised to detect genetic changes due to selective pro...
Vicente Arnau, Miguel Gallach, J. Ignasi Lucas, Ig...
GECCO
2006
Springer
282views Optimization» more  GECCO 2006»
13 years 11 months ago
A genetic algorithm for the longest common subsequence problem
A genetic algorithm for the longest common subsequence problem encodes candidate sequences as binary strings that indicate subsequences of the shortest or first string. Its fitnes...
Brenda Hinkemeyer, Bryant A. Julstrom
INFOSCALE
2006
ACM
14 years 1 months ago
Scalable hardware accelerator for comparing DNA and protein sequences
Abstract— Comparing genetic sequences is a well-known problem in bioinformatics. Newly determined sequences are being compared to known sequences stored in databases in order to ...
Philippe Faes, Bram Minnaert, Mark Christiaens, Er...