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COR
2008
99views more  COR 2008»
13 years 10 months ago
Genetic local search for multicast routing with pre-processing by logarithmic simulated annealing
Over the past few years, several local search algorithms have been proposed for various problems related to multicast routing in the off-line mode. We describe a population-based ...
Mohammed S. Zahrani, Martin J. Loomes, James A. Ma...
CSL
2010
Springer
13 years 10 months ago
Discriminative training of HMMs for automatic speech recognition: A survey
Recently, discriminative training (DT) methods have achieved tremendous progress in automatic speech recognition (ASR). In this survey article, all mainstream DT methods in speech...
Hui Jiang
ALMOB
2006
106views more  ALMOB 2006»
13 years 10 months ago
Multiple sequence alignment with user-defined anchor points
Background: Automated software tools for multiple alignment often fail to produce biologically meaningful results. In such situations, expert knowledge can help to improve the qua...
Burkhard Morgenstern, Sonja J. Prohaska, Dirk P&ou...
BMCBI
2006
120views more  BMCBI 2006»
13 years 10 months ago
Optimizing amino acid substitution matrices with a local alignment kernel
Background: Detecting remote homologies by direct comparison of protein sequences remains a challenging task. We had previously developed a similarity score between sequences, cal...
Hiroto Saigo, Jean-Philippe Vert, Tatsuya Akutsu
BMCBI
2006
137views more  BMCBI 2006»
13 years 10 months ago
A maximum likelihood framework for protein design
Background: The aim of protein design is to predict amino-acid sequences compatible with a given target structure. Traditionally envisioned as a purely thermodynamic question, thi...
Claudia L. Kleinman, Nicolas Rodrigue, Céci...