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ALGOSENSORS
2009
Springer
13 years 6 months ago
Brief Announcement: Universal Data Aggregation Trees for Sensor Networks in Low Doubling Metrics
Abstract. We describe a novel approach for constructing a single spanning tree for data aggregation towards a sink node. The tree is universal in the sense that it is static and in...
Srinivasagopalan Srivathsan, Costas Busch, S. Sith...
CSB
2005
IEEE
130views Bioinformatics» more  CSB 2005»
14 years 2 months ago
TreeRefiner: A Tool for Refining a Multiple Alignment on a Phylogenetic Tree
We present TreeRefiner, a tool for refining multiple alignments of biological sequences. Given a multiple alignment, a phylogenetic tree, and scoring parameters as input, TreeRefi...
Aswath Manohar, Serafim Batzoglou
BMCBI
2006
156views more  BMCBI 2006»
13 years 8 months ago
GOFFA: Gene Ontology For Functional Analysis - A FDA Gene Ontology Tool for Analysis of Genomic and Proteomic Data
Background: Gene Ontology (GO) characterizes and categorizes the functions of genes and their products according to biological processes, molecular functions and cellular componen...
Hongmei Sun, Hong Fang, Tao Chen, Roger Perkins, W...
WG
2005
Springer
14 years 2 months ago
Algebraic Operations on PQ Trees and Modular Decomposition Trees
Partitive set families are families of sets that can be quite large, but have a compact, recursive representation in the form of a tree. This tree is a common generalization of PQ...
Ross M. McConnell, Fabien de Montgolfier
IPPS
2009
IEEE
14 years 3 months ago
Exploring FPGAs for accelerating the phylogenetic likelihood function
Driven by novel biological wet lab techniques such as pyrosequencing there has been an unprecedented molecular data explosion over the last 2-3 years. The growth of biological seq...
Nikolaos Alachiotis, Euripides Sotiriades, Apostol...