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BMCBI
2004
150views more  BMCBI 2004»
13 years 7 months ago
SS-Wrapper: a package of wrapper applications for similarity searches on Linux clusters
Background: Large-scale sequence comparison is a powerful tool for biological inference in modern molecular biology. Comparing new sequences to those in annotated databases is a u...
Chunlin Wang, Elliot J. Lefkowitz
SAC
2008
ACM
13 years 7 months ago
Implementing Java modeling language contracts with AspectJ
The Java Modeling Language (JML) is a behavioral interface specification language (BISL) designed for Java. It was developed to improve functional software correctness of Java app...
Henrique Rebêlo, Sérgio Soares, Ricar...
SIGSOFT
2008
ACM
14 years 8 months ago
Extended exceptions for contingencies and their implications for the engineering process
We observed a general problem of sequential programs, which often results in design and programming errors in industrial software engineering projects, and propose a solution appr...
Thorsten van Ellen, Wilhelm Hasselbring
APLAS
2006
ACM
14 years 1 months ago
A Bytecode Logic for JML and Types
This document contains the Isabelle/HOL sources underlying our paper A bytecode logic for JML and types [2], updated to Isabelle 2008. We present a program logic for a subset of s...
Lennart Beringer, Martin Hofmann
ICS
2005
Tsinghua U.
14 years 1 months ago
Lightweight reference affinity analysis
Previous studies have shown that array regrouping and structure splitting significantly improve data locality. The most effective technique relies on profiling every access to eve...
Xipeng Shen, Yaoqing Gao, Chen Ding, Roch Archamba...