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BMCBI
2005
94views more  BMCBI 2005»
13 years 10 months ago
Computational identification of strain-, species- and genus-specific proteins
Background: The identification of unique proteins at different taxonomic levels has both scientific and practical value. Strain-, species- and genus-specific proteins can provide ...
Raja Mazumder, Darren A. Natale, Sudhir Murthy, Ra...
BMCBI
2005
292views more  BMCBI 2005»
13 years 10 months ago
Atlas - a data warehouse for integrative bioinformatics
Background: We present a biological data warehouse called Atlas that locally stores and integrates biological sequences, molecular interactions, homology information, functional a...
Sohrab P. Shah, Yong Huang, Tao Xu, Macaire M. S. ...
VLDB
2002
ACM
131views Database» more  VLDB 2002»
13 years 9 months ago
ProTDB: Probabilistic Data in XML
Whereas traditional databases manage only deterministic information, many applications that use databases involve uncertain data. This paper presents a Probabilistic Tree Data Bas...
Andrew Nierman, H. V. Jagadish
BMCBI
2008
173views more  BMCBI 2008»
13 years 10 months ago
Gene Vector Analysis (Geneva): A unified method to detect differentially-regulated gene sets and similar microarray experiments
Background: Microarray experiments measure changes in the expression of thousands of genes. The resulting lists of genes with changes in expression are then searched for biologica...
Stephen W. Tanner, Pankaj Agarwal
SOFSEM
2005
Springer
14 years 3 months ago
Tier Aspect Model Based on Updatable Views
The tier aspect model addresses Aspect Oriented Programming (AOP) in the context of database applications. It is a new technique of separation of concerns through tiers implemented...
Radoslaw Adamus, Kazimierz Subieta