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ICSE
2009
IEEE-ACM
14 years 8 months ago
Analyzing critical process models through behavior model synthesis
Process models capture tasks performed by agents together with their control flow. Building and analyzing such models is important but difficult in certain areas such as safety-cr...
Christophe Damas, Bernard Lambeau, Francois Roucou...
BMCBI
2010
175views more  BMCBI 2010»
13 years 7 months ago
The BridgeDb framework: standardized access to gene, protein and metabolite identifier mapping services
Background: Many complementary solutions are available for the identifier mapping problem. This creates an opportunity for bioinformatics tool developers. Tools can be made to fle...
Martijn P. van Iersel, Alexander R. Pico, Thomas K...
RE
2006
Springer
13 years 7 months ago
Interaction Analysis in Aspect-Oriented Models
Aspect-oriented concepts are currently introduced in all phases of the software development life cycle. However, the complexity of interactions among different aspects and between...
Katharina Mehner, Mattia Monga, Gabriele Taentzer
BMCBI
2010
116views more  BMCBI 2010»
13 years 7 months ago
SEQADAPT: an adaptable system for the tracking, storage and analysis of high throughput sequencing experiments
Background: High throughput sequencing has become an increasingly important tool for biological research. However, the existing software systems for managing and processing these ...
David B. Burdick, Christopher C. Cavnor, Jeremy Ha...
BMCBI
2006
122views more  BMCBI 2006»
13 years 7 months ago
PET-Tool: a software suite for comprehensive processing and managing of Paired-End diTag (PET) sequence data
Background: We recently developed the Paired End diTag (PET) strategy for efficient characterization of mammalian transcriptomes and genomes. The paired end nature of short PET se...
Kuo Ping Chiu, Chee-Hong Wong, Qiongyu Chen, Prami...