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CIKM
2008
Springer
13 years 11 months ago
A system for finding biological entities that satisfy certain conditions from texts
Finding biological entities (such as genes or proteins) that satisfy certain conditions from texts is an important and challenging task in biomedical information retrieval and tex...
Wei Zhou, Clement T. Yu, Weiyi Meng
BIBM
2008
IEEE
141views Bioinformatics» more  BIBM 2008»
14 years 3 months ago
Protein-Protein Interaction Network Alignment by Quantitative Simulation
We adapt a network simulation algorithm called quantitative simulation (QSim) for use in the alignment of biological networks. Unlike most network alignment methods, QSim finds l...
Perry Evans, Ted Sandler, Lyle H. Ungar
SAC
2011
ACM
12 years 11 months ago
Biomedical concept extraction based on combining the content-based and word order similarities
It is well known that the main objective of conceptual retrieval models is to go beyond simple term matching by relaxing term independence assumption through concept recognition. ...
Duy Dinh, Lynda Tamine
BMCBI
2004
156views more  BMCBI 2004»
13 years 8 months ago
GeneXplorer: an interactive web application for microarray data visualization and analysis
Background: When publishing large-scale microarray datasets, it is of great value to create supplemental websites where either the full data, or selected subsets corresponding to ...
Christian A. Rees, Janos Demeter, John C. Matese, ...
NAR
1998
76views more  NAR 1998»
13 years 8 months ago
U-insertion/deletion Edited Sequence Database
Uridine insertion/deletion RNA editing is a posttranscriptional RNA modification occurring in the mitochondria of kinetoplastid protozoa. The U-insertion/ deletion Edited Sequence...
Larry Simpson, Shirley H. Wang, Otavio H. Thiemann...