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» GPX: Interactive Mining of Gene Expression Data
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BMCBI
2004
165views more  BMCBI 2004»
13 years 7 months ago
Analysis of oligonucleotide array experiments with repeated measures using mixed models
Background: Two or more factor mixed factorial experiments are becoming increasingly common in microarray data analysis. In this case study, the two factors are presence (Patients...
Hao Li, Constance L. Wood, Thomas V. Getchell, Mar...
BIBE
2001
IEEE
193views Bioinformatics» more  BIBE 2001»
13 years 11 months ago
GIMS - A Data Warehouse for Storage and Analysis of Genome Sequence and Functional Data
Effective analysis of genome sequences and associated functional data requires access to many different kinds of biological information. For example, when analysing gene expressio...
Mike Cornell, Norman W. Paton, Shengli Wu, Carole ...
KDD
2005
ACM
139views Data Mining» more  KDD 2005»
14 years 8 months ago
Reasoning about sets using redescription mining
Redescription mining is a newly introduced data mining problem that seeks to find subsets of data that afford multiple definitions. It can be viewed as a generalization of associa...
Mohammed Javeed Zaki, Naren Ramakrishnan
BMCBI
2008
163views more  BMCBI 2008»
13 years 7 months ago
The Annotation, Mapping, Expression and Network (AMEN) suite of tools for molecular systems biology
Background: High-throughput genome biological experiments yield large and multifaceted datasets that require flexible and user-friendly analysis tools to facilitate their interpre...
Frédéric Chalmel, Michael Primig
PAKDD
2010
ACM
203views Data Mining» more  PAKDD 2010»
14 years 10 days ago
Finding Itemset-Sharing Patterns in a Large Itemset-Associated Graph
Both itemset mining and graph mining have been studied independently. Here, we introduce a novel data structure, which is an unweighted graph whose vertices contain itemsets. From ...
Mutsumi Fukuzaki, Mio Seki, Hisashi Kashima, Jun S...