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» GeNESiS: gene network evolution simulation software
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HICSS
2008
IEEE
113views Biometrics» more  HICSS 2008»
14 years 1 months ago
MONSOON: A Coevolutionary Multiobjective Adaptation Framework for Dynamic Wireless Sensor Networks
Wireless sensor applications (WSNs) are often required to simultaneously satisfy conflicting operational objectives (e.g., latency and power consumption). Based on an observation...
Pruet Boonma, Junichi Suzuki
BMCBI
2004
323views more  BMCBI 2004»
13 years 6 months ago
Biochemical Network Stochastic Simulator (BioNetS): software for stochastic modeling of biochemical networks
Background: Intrinsic fluctuations due to the stochastic nature of biochemical reactions can have large effects on the response of biochemical networks. This is particularly true ...
David Adalsteinsson, David McMillen, Timothy C. El...
WABI
2009
Springer
128views Bioinformatics» more  WABI 2009»
14 years 1 months ago
Improving Inference of Transcriptional Regulatory Networks Based on Network Evolutionary Models
Abstract. Computational inference of transcriptional regulatory networks remains a challenging problem, in part due to the lack of strong network models. In this paper we present e...
Xiuwei Zhang, Bernard M. E. Moret
BMCBI
2010
176views more  BMCBI 2010»
13 years 7 months ago
Reverse engineering gene regulatory network from microarray data using linear time-variant model
nd: Gene regulatory network is an abstract mapping of gene regulations in living cells that can help to predict the system behavior of living organisms. Such prediction capability...
Mitra Kabir, Nasimul Noman, Hitoshi Iba
COCOON
2005
Springer
14 years 16 days ago
Quartet-Based Phylogeny Reconstruction from Gene Orders
Abstract. Phylogenetic reconstruction from gene-rearrangement data is attracting increasing attention from biologists and computer scientists. Methods used in reconstruction includ...
Tao Liu, Jijun Tang, Bernard M. E. Moret