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» GeNESiS: gene network evolution simulation software
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ALIFE
2000
13 years 6 months ago
Duplication of Modules Facilitates the Evolution of Functional Specialization
The evolution of simulated robots with three different architectures is studied in this article. We compare a nonmodular feed-forward network, a hardwired modular, and a duplicatio...
Raffaele Calabretta, Stefano Nolfi, Domenico Paris...
CISIS
2010
IEEE
13 years 5 months ago
Modeling of Stress-induced Regulatory Cascades Involving Transcription Factor Dimers
Regulatory cascades consisting of stress-induced gene modules and their transcriptional regulators were recently identified and quantitatively modeled using Artificial Neural Netwo...
Maria Manioudaki, Panayiota Poirazi
GECCO
2010
Springer
191views Optimization» more  GECCO 2010»
13 years 11 months ago
Initialization parameter sweep in ATHENA: optimizing neural networks for detecting gene-gene interactions in the presence of sma
Recent advances in genotyping technology have led to the generation of an enormous quantity of genetic data. Traditional methods of statistical analysis have proved insufficient i...
Emily Rose Holzinger, Carrie C. Buchanan, Scott M....
WOSP
2005
ACM
14 years 17 days ago
Modeling the performance of a NAT/firewall network service for the IXP2400
The evolution towards IP-aware access networks creates the possibility (and, indeed, the desirability) of additional network services, like firewalling or NAT, integrated into th...
Tom Verdickt, Wim Van de Meerssche, Koert Vlaeminc...
BIBE
2007
IEEE
127views Bioinformatics» more  BIBE 2007»
14 years 1 months ago
A Heuristic for Phylogenetic Reconstruction Using Transposition
Abstract—Because of the advent of high-throughput sequencing and the consequent reduction in cost of sequencing, many organisms have been completely sequenced and most of their g...
Feng Yue, Meng Zhang, Jijun Tang