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    ISMB
    1996
    155views Computational Biology» more  ISMB 1996»
    Gene Recognition in Cyanobacterium Genomic Sequence Data Using the Hidden Markov Model
    14 years 15 days ago
    Gene Recognition in Cyanobacterium Genomic Sequence Data Using the Hidden Markov Model
    Download  www.aaai.org
    We have developed a hidden Markov model (HMM)to detect the protein coding regions within one megabase contiguous sequence data, registered in a database called GenBankin eight ent...
    Tetsushi Yada, Makoto Hirosawa
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    ALMOB
    2006
    155views more  ALMOB 2006»
    A phylogenetic generalized hidden Markov model for predicting alternatively spliced exons
    13 years 11 months ago
    A phylogenetic generalized hidden Markov model for predicting alternatively spliced exons
    Download  www.almob.org
    Background: An important challenge in eukaryotic gene prediction is accurate identification of alternatively spliced exons. Functional transcripts can go undetected in gene expres...
    Jonathan E. Allen, Steven L. Salzberg
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    BMCBI
    2006
    147views more  BMCBI 2006»
    A hidden Markov model approach for determining expression from genomic tiling micro arrays
    13 years 11 months ago
    A hidden Markov model approach for determining expression from genomic tiling micro arrays
    Download  www.biomedcentral.com
    Background: Genomic tiling micro arrays have great potential for identifying previously undiscovered coding as well as non-coding transcription. To-date, however, analyses of thes...
    Kasper Munch, Paul P. Gardner, Peter Arctander, An...
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    BMCBI
    2010
    87views more  BMCBI 2010»
    Epigenetic domains found in mouse embryonic stem cells via a hidden Markov model
    13 years 11 months ago
    Epigenetic domains found in mouse embryonic stem cells via a hidden Markov model
    Download  www.biomedcentral.com
    Background: Epigenetics is an important layer of transcriptional control necessary for cell-type specific gene regulation. Recent studies have shown significant epigenetic pattern...
    Jessica L. Larson, Guo-Cheng Yuan
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    BMCBI
    2006
    160views more  BMCBI 2006»
    Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources
    13 years 11 months ago
    Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources
    Download  www.biomedcentral.com
    Background: In order to improve gene prediction, extrinsic evidence on the gene structure can be collected from various sources of information such as genome-genome comparisons an...
    Mario Stanke, Oliver Schöffmann, Burkhard Mor...
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