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    » Gene Set Expression Comparison kit for BRB-ArrayTools
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    BMCBI
    2010
    193views more  BMCBI 2010»
    Probe set filtering increases correlation between Affymetrix GeneChip and qRT-PCR expression measurements
    13 years 8 months ago
    Probe set filtering increases correlation between Affymetrix GeneChip and qRT-PCR expression measurements
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    Background: Affymetrix GeneChip microarrays are popular platforms for expression profiling in two types of studies: detection of differential expression computed by p-values of t-...
    Jakub Mieczkowski, Magdalena E. Tyburczy, Michal D...
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    BMCBI
    2005
    144views more  BMCBI 2005»
    Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in
    13 years 8 months ago
    Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in
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    Background: Comparison of data produced on different microarray platforms often shows surprising discordance. It is not clear whether this discrepancy is caused by noisy data or b...
    Scott L. Carter, Aron C. Eklund, Brigham H. Mecham...
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    BIOINFORMATICS
    2006
    120views more  BIOINFORMATICS 2006»
    Comparison of Affymetrix GeneChip expression measures
    13 years 8 months ago
    Comparison of Affymetrix GeneChip expression measures
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    Motivation: In the Affymetrix GeneChip system, preprocessing occurs before one obtains expression level measurements. Because the number of competing preprocessing methods was lar...
    Rafael A. Irizarry, Zhijin Wu, Harris A. Jaffee
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    BMCBI
    2006
    131views more  BMCBI 2006»
    The statistics of identifying differentially expressed genes in Expresso and TM4: a comparison
    13 years 8 months ago
    The statistics of identifying differentially expressed genes in Expresso and TM4: a comparison
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    Background: Analysis of DNA microarray data takes as input spot intensity measurements from scanner software and returns differential expression of genes between two conditions, t...
    Allan A. Sioson, Shrinivasrao P. Mane, Pinghua Li,...
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    BMCBI
    2008
    133views more  BMCBI 2008»
    A Web-based and Grid-enabled dChip version for the analysis of large sets of gene expression data
    13 years 8 months ago
    A Web-based and Grid-enabled dChip version for the analysis of large sets of gene expression data
    Download  www.biomedcentral.com
    Background: Microarray techniques are one of the main methods used to investigate thousands of gene expression profiles for enlightening complex biological processes responsible f...
    Luca Corradi, Marco Fato, Ivan Porro, Silvia Scagl...
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