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BIOCOMP
2009
13 years 8 months ago
GEFERENCE: Reference Database for Construing Personal Genome Expression
- With the lowering cost and the increasing discoveries, genomics research filed has materialized personal genome era. Especially, microarray gene expression platform has already m...
Changwon Keum, Ju Han Kim, Young Soo Song, Kyoung ...
BMCBI
2005
143views more  BMCBI 2005»
13 years 7 months ago
Gene capture prediction and overlap estimation in EST sequencing from one or multiple libraries
Background: In expressed sequence tag (EST) sequencing, we are often interested in how many genes we can capture in an EST sample of a targeted size. This information provides ins...
Ji-Ping Z. Wang, Bruce G. Lindsay 0002, Liying Cui...
EUROPAR
2003
Springer
14 years 18 days ago
Obtaining Hardware Performance Metrics for the BlueGene/L Supercomputer
Hardware performance monitoring is the basis of modern performance analysis tools for application optimization. We are interested in providing such performance analysis tools for t...
Pedro Mindlin, José R. Brunheroto, Luiz De ...
BCB
2010
156views Bioinformatics» more  BCB 2010»
13 years 2 months ago
RepFrag: a graph based method for finding repeats and transposons from fragmented genomes
Growing sequencing and assembly efforts have been met by the advances in high throughput machines. However, the presence of massive amounts of repeats and transposons complicates ...
Nirmalya Bandyopadhyay, A. Mark Settles, Tamer Kah...
BMCBI
2008
125views more  BMCBI 2008»
13 years 7 months ago
SynteBase/SynteView: a tool to visualize gene order conservation in prokaryotic genomes
Background: It has been repeatedly observed that gene order is rapidly lost in prokaryotic genomes. However, persistent synteny blocks are found when comparing more or less distan...
Frédéric Lemoine, Bernard Labedan, O...