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» Gene functional classification from heterogeneous data
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179
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DILS
2008
Springer
15 years 5 months ago
Semi Supervised Spectral Clustering for Regulatory Module Discovery
We propose a novel semi-supervised clustering method for the task of gene regulatory module discovery. The technique uses data on dna binding as prior knowledge to guide the proces...
Alok Mishra, Duncan Gillies
175
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BMCBI
2008
128views more  BMCBI 2008»
15 years 3 months ago
In silico analysis of expressed sequence tags from Trichostrongylus vitrinus (Nematoda): comparison of the automated ESTExplorer
Background: The analysis of expressed sequence tags (EST) offers a rapid and cost effective approach to elucidate the transcriptome of an organism, but requires several computatio...
Shivashankar H. Nagaraj, Robin B. Gasser, Alasdair...
130
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ICCS
2007
Springer
15 years 7 months ago
Adaptive Sparse Grid Classification Using Grid Environments
Common techniques tackling the task of classification in data mining employ ansatz functions associated to training data points to fit the data as well as possible. Instead, the fe...
Dirk Pflüger, Ioan Lucian Muntean, Hans-Joach...
168
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NN
2007
Springer
267views Neural Networks» more  NN 2007»
15 years 3 months ago
Modeling of gene regulatory networks with hybrid differential evolution and particle swarm optimization
In the last decade, recurrent neural networks (RNNs) have attracted more efforts in inferring genetic regulatory networks (GRNs), using time series gene expression data from micro...
Rui Xu, Ganesh K. Venayagamoorthy, Donald C. Wunsc...
133
Voted
ICC
2007
IEEE
117views Communications» more  ICC 2007»
15 years 10 months ago
Applying Techniques from Frame Synchronization for Biological Sequence Analysis
— During the last years, the amount of genetic data available has increased rapidly which creates the demand for advanced techniques for their interpretation. In the following, w...
Johanna Weindl, Joachim Hagenauer