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» Gene functional similarity search tool (GFSST)
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BMCBI
2010
131views more  BMCBI 2010»
13 years 8 months ago
FACT: Functional annotation transfer between proteins with similar feature architectures
Background: The increasing number of sequenced genomes provides the basis for exploring the genetic and functional diversity within the tree of life. Only a tiny fraction of the e...
Tina Koestler, Arndt von Haeseler, Ingo Ebersberge...
GECCO
2008
Springer
116views Optimization» more  GECCO 2008»
13 years 9 months ago
Evolving similarity functions for code plagiarism detection
Students are often asked to submit electronic copies of their program code as part of assessment in computer science courses. To counter code plagiarism, educational institutions ...
Victor Ciesielski, Nelson Wu, Seyed M. M. Tahaghog...
ASAP
2004
IEEE
124views Hardware» more  ASAP 2004»
14 years 14 days ago
Biosequence Similarity Search on the Mercury System
Biosequence similarity search is an important application in modern molecular biology. Search algorithms aim to identify sets of sequences whose extensional similarity suggests a c...
Praveen Krishnamurthy, Jeremy Buhler, Roger D. Cha...
BMCBI
2011
13 years 3 months ago
A novel approach to the clustering of microarray data via nonparametric density estimation
Background: Cluster analysis is a crucial tool in several biological and medical studies dealing with microarray data. Such studies pose challenging statistical problems due to di...
Riccardo De Bin, Davide Risso
NAR
2008
103views more  NAR 2008»
13 years 8 months ago
DBD--taxonomically broad transcription factor predictions: new content and functionality
DNA-binding domain (DBD) is a database of predicted sequence-specific DNA-binding transcription factors (TFs) for all publicly available proteomes. The proteomes have increased fr...
Derek Wilson, Varodom Charoensawan, Sarah K. Kumme...