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» Gene networks inference using dynamic Bayesian networks
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NIPS
2000
15 years 6 months ago
Explaining Away in Weight Space
Explaining away has mostly been considered in terms of inference of states in belief networks. We show how it can also arise in a Bayesian context in inference about the weights g...
Peter Dayan, Sham Kakade
134
Voted
ICNP
2007
IEEE
15 years 11 months ago
Inferring the Origin of Routing Changes using Link Weights
— The global Internet routing infrastructure is a large and complex distributed system where routing changes occur constantly. Our objective in this paper is to develop a simple ...
Mohit Lad, Ricardo V. Oliveira, Daniel Massey, Lix...
BMCBI
2010
122views more  BMCBI 2010»
14 years 11 months ago
Functional enrichment analyses and construction of functional similarity networks with high confidence function prediction by PF
Background: A new paradigm of biological investigation takes advantage of technologies that produce large high throughput datasets, including genome sequences, interactions of pro...
Troy Hawkins, Meghana Chitale, Daisuke Kihara
BMCBI
2008
111views more  BMCBI 2008»
15 years 4 months ago
A perl package and an alignment tool for phylogenetic networks
Background: Phylogenetic networks are a generalization of phylogenetic trees that allow for the representation of evolutionary events acting at the population level, like recombin...
Gabriel Cardona, Francesc Rosselló, Gabriel...
JBI
2002
15 years 4 months ago
Revising regulatory networks: from expression data to linear causal models
Discovering the complex regulatory networks that govern mRNA expression is an important but difficult problem. Many current approaches use only expression data from microarrays to...
Stephen D. Bay, Jeff Shrager, Andrew Pohorille, Pa...