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» Gene set analysis for longitudinal gene expression data
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BMCBI
2004
100views more  BMCBI 2004»
13 years 8 months ago
Handling multiple testing while interpreting microarrays with the Gene Ontology Database
Background: The development of software tools that analyze microarray data in the context of genetic knowledgebases is being pursued by multiple research groups using different me...
Michael V. Osier, Hongyu Zhao, Kei-Hoi Cheung
NAR
2007
97views more  NAR 2007»
13 years 8 months ago
Gene Aging Nexus: a web database and data mining platform for microarray data on aging
The recent development of microarray technology provided unprecedented opportunities to understand the genetic basis of aging. So far, many microarray studies have addressed aging...
Fei Pan, Chi-Hsien Chiu, Sudip Pulapura, Michael R...
BMCBI
2005
94views more  BMCBI 2005»
13 years 8 months ago
Visualization-based discovery and analysis of genomic aberrations in microarray data
Background: Chromosomal copy number changes (aneuploidies) play a key role in cancer progression and molecular evolution. These copy number changes can be studied using microarray...
Chad L. Myers, Xing Chen, Olga G. Troyanskaya
TCBB
2010
176views more  TCBB 2010»
13 years 7 months ago
Feature Selection for Gene Expression Using Model-Based Entropy
—Gene expression data usually contain a large number of genes, but a small number of samples. Feature selection for gene expression data aims at finding a set of genes that best...
Shenghuo Zhu, Dingding Wang, Kai Yu, Tao Li, Yihon...
BMCBI
2006
182views more  BMCBI 2006»
13 years 9 months ago
AceTree: a tool for visual analysis of Caenorhabditis elegans embryogenesis
Background: The invariant lineage of the nematode Caenorhabditis elegans has potential as a powerful tool for the description of mutant phenotypes and gene expression patterns. We...
Thomas J. Boyle, Zhirong Bao, John I. Murray, Carl...