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» Gene set analysis for longitudinal gene expression data
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BMCBI
2004
131views more  BMCBI 2004»
13 years 8 months ago
A web services choreography scenario for interoperating bioinformatics applications
Background: Very often genome-wide data analysis requires the interoperation of multiple databases and analytic tools. A large number of genome databases and bioinformatics applic...
Remko de Knikker, Youjun Guo, Jin-long Li, Albert ...
JCB
2007
198views more  JCB 2007»
13 years 8 months ago
Bayesian Hierarchical Model for Large-Scale Covariance Matrix Estimation
Many bioinformatics problems can implicitly depend on estimating large-scale covariance matrix. The traditional approaches tend to give rise to high variance and low accuracy esti...
Dongxiao Zhu, Alfred O. Hero III
SDM
2009
SIAM
130views Data Mining» more  SDM 2009»
14 years 5 months ago
FuncICA for Time Series Pattern Discovery.
We introduce FuncICA, a new independent component analysis method for pattern discovery in inherently functional data, such as time series data. FuncICA can be considered an analo...
Alexander Gray, Nishant Mehta
CINQ
2004
Springer
138views Database» more  CINQ 2004»
14 years 2 months ago
Relevancy in Constraint-Based Subgroup Discovery
This chapter investigates subgroup discovery as a task of constraint-based mining of local patterns, aimed at describing groups of individuals with unusual distributional character...
Nada Lavrac, Dragan Gamberger
BMCBI
2008
126views more  BMCBI 2008»
13 years 8 months ago
NITPICK: peak identification for mass spectrometry data
Background: The reliable extraction of features from mass spectra is a fundamental step in the automated analysis of proteomic mass spectrometry (MS) experiments. Results: This co...
Bernhard Y. Renard, Marc Kirchner, Hanno Steen, Ju...