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» Gene set analysis for longitudinal gene expression data
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BMCBI
2006
374views more  BMCBI 2006»
13 years 8 months ago
AMDA: an R package for the automated microarray data analysis
Background: Microarrays are routinely used to assess mRNA transcript levels on a genome-wide scale. Large amount of microarray datasets are now available in several databases, and...
Mattia Pelizzola, Norman Pavelka, Maria Foti, Paol...
BMCBI
2005
137views more  BMCBI 2005»
13 years 8 months ago
ArrayQuest: a web resource for the analysis of DNA microarray data
Background: Numerous microarray analysis programs have been created through the efforts of Open Source software development projects. Providing browser-based interfaces that allow...
Gary L. Argraves, Saurin D. Jani, Jeremy L. Barth,...
ITNG
2008
IEEE
14 years 3 months ago
GlycoVault: A Bioinformatics Infrastructure for Glycan Pathway Visualization, Analysis and Modeling
Glycan biosynthesis is the process by which glycans are built in the cells. Information about the process is available from several Web accessible databases, published papers, exp...
Shravya Nimmagadda, Amrita Basu, Matthew Eavenson,...
BMCBI
2010
151views more  BMCBI 2010»
13 years 8 months ago
Data reduction for spectral clustering to analyze high throughput flow cytometry data
Background: Recent biological discoveries have shown that clustering large datasets is essential for better understanding biology in many areas. Spectral clustering in particular ...
Habil Zare, Parisa Shooshtari, Arvind Gupta, Ryan ...
BMCBI
2006
126views more  BMCBI 2006»
13 years 8 months ago
JUICE: a data management system that facilitates the analysis of large volumes of information in an EST project workflow
Background: Expressed sequence tag (EST) analyses provide a rapid and economical means to identify candidate genes that may be involved in a particular biological process. These E...
Mariano Latorre, Herman Silva, Juan Saba, Carito G...