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» Gene set analysis using principal components
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COMPUTER
1999
69views more  COMPUTER 1999»
13 years 10 months ago
Scientific Components Are Coming
abstract mathematical or physical statement, not something specific. The way scientific programmers most frequently verify that their programs are correct is to examine their resul...
Paul F. Dubois
BMCBI
2006
164views more  BMCBI 2006»
13 years 11 months ago
Evaluation of clustering algorithms for gene expression data
Background: Cluster analysis is an integral part of high dimensional data analysis. In the context of large scale gene expression data, a filtered set of genes are grouped togethe...
Susmita Datta, Somnath Datta
BMCBI
2005
82views more  BMCBI 2005»
13 years 10 months ago
Quality assessment of microarrays: Visualization of spatial artifacts and quantitation of regional biases
Background: Quality-control is an important issue in the analysis of gene expression microarrays. One type of problem is regional bias, in which one region of a chip shows artifac...
Mark Reimers, John N. Weinstein
BMCBI
2006
122views more  BMCBI 2006»
13 years 11 months ago
Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle
Background: A transcriptional regulatory module (TRM) is a set of genes that is regulated by a common set of transcription factors (TFs). By organizing the genome into TRMs, a liv...
Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen
BMCBI
2008
102views more  BMCBI 2008»
13 years 11 months ago
Fast splice site detection using information content and feature reduction
Background: Accurate identification of splice sites in DNA sequences plays a key role in the prediction of gene structure in eukaryotes. Already many computational methods have be...
A. K. M. A. Baten, Saman K. Halgamuge, Bill C. H. ...