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» Gene set analysis using principal components
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COLT
2010
Springer
13 years 6 months ago
Principal Component Analysis with Contaminated Data: The High Dimensional Case
We consider the dimensionality-reduction problem (finding a subspace approximation of observed data) for contaminated data in the high dimensional regime, where the number of obse...
Huan Xu, Constantine Caramanis, Shie Mannor
BMCBI
2006
115views more  BMCBI 2006»
13 years 8 months ago
Multivariate curve resolution of time course microarray data
Background: Modeling of gene expression data from time course experiments often involves the use of linear models such as those obtained from principal component analysis (PCA), i...
Peter D. Wentzell, Tobias K. Karakach, Sushmita Ro...
WEBI
2005
Springer
14 years 1 months ago
HITS is Principal Components Analysis
In this work, we show that Kleinberg’s hubs and authorities model (HITS) is simply Principal Components Analysis (PCA; maybe the most widely used multivariate statistical analys...
Marco Saerens, François Fouss
BMCBI
2008
96views more  BMCBI 2008»
13 years 8 months ago
Use of normalization methods for analysis of microarrays containing a high degree of gene effects
Background: High-throughput microarrays are widely used to study gene expression across tissues and developmental stages. Analysis of gene expression data is challenging in these ...
Terri T. Ni, William J. Lemon, Yu Shyr, Tao P. Zho...
AIPR
2002
IEEE
14 years 1 months ago
ICA Mixture Model based Unsupervised Classification of Hyperspectral Imagery
Conventional remote sensing classification techniques that model the data in each class with a multivariate Gaussian distribution are inefficient, as this assumption is generally ...
Chintan A. Shah, Manoj K. Arora, Stefan A. Robila,...