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» Gene set analysis using principal components
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BMCBI
2005
201views more  BMCBI 2005»
13 years 7 months ago
Principal component analysis for predicting transcription-factor binding motifs from array-derived data
Background: The responses to interleukin 1 (IL-1) in human chondrocytes constitute a complex regulatory mechanism, where multiple transcription factors interact combinatorially to...
Yunlong Liu, Matthew P. Vincenti, Hiroki Yokota
BMCBI
2008
115views more  BMCBI 2008»
13 years 7 months ago
Principal components analysis based methodology to identify differentially expressed genes in time-course microarray data
Background: Time-course microarray experiments are being increasingly used to characterize dynamic biological processes. In these experiments, the goal is to identify genes differ...
Sudhakar Jonnalagadda, Rajagopalan Srinivasan
BMCBI
2010
144views more  BMCBI 2010»
13 years 7 months ago
Super-sparse principal component analyses for high-throughput genomic data
Background: Principal component analysis (PCA) has gained popularity as a method for the analysis of highdimensional genomic data. However, it is often difficult to interpret the ...
Donghwan Lee, Woojoo Lee, Youngjo Lee, Yudi Pawita...
CORR
2010
Springer
320views Education» more  CORR 2010»
13 years 7 months ago
An algorithm for the principal component analysis of large data sets
Recently popularized randomized methods for principal component analysis (PCA) efficiently and reliably produce nearly optimal accuracy -- even on parallel processors -- unlike the...
Nathan Halko, Per-Gunnar Martinsson, Yoel Shkolnis...
APPT
2005
Springer
14 years 19 days ago
Principal Component Analysis for Distributed Data Sets with Updating
Identifying the patterns of large data sets is a key requirement in data mining. A powerful technique for this purpose is the principal component analysis (PCA). PCA-based clusteri...
Zheng-Jian Bai, Raymond H. Chan, Franklin T. Luk