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» Gene set analysis using principal components
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IWINAC
2005
Springer
14 years 1 months ago
Separation of Extracellular Spikes: When Wavelet Based Methods Outperform the Principle Component Analysis
spike separation is a basic prerequisite for analyzing of the cooperative neural behavior and neural code when registering extracelluIarly. Final performance of any spike sorting m...
Alexey N. Pavlov, Valeri A. Makarov, Ioulia Makaro...
BMCBI
2011
13 years 3 months ago
Multivariate analysis of microarray data: differential expression and differential connection
Background: Typical analysis of microarray data ignores the correlation between gene expression values. In this paper we present a model for microarray data which specifically all...
Harri T. Kiiveri
BMCBI
2011
13 years 3 months ago
Motif-guided sparse decomposition of gene expression data for regulatory module identification
Background: Genes work coordinately as gene modules or gene networks. Various computational approaches have been proposed to find gene modules based on gene expression data; for e...
Ting Gong, Jianhua Xuan, Li Chen, Rebecca B. Riggi...
BMCBI
2005
144views more  BMCBI 2005»
13 years 8 months ago
Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in
Background: Comparison of data produced on different microarray platforms often shows surprising discordance. It is not clear whether this discrepancy is caused by noisy data or b...
Scott L. Carter, Aron C. Eklund, Brigham H. Mecham...
FUIN
2002
123views more  FUIN 2002»
13 years 8 months ago
Learning Rough Set Classifiers from Gene Expressions and Clinical Data
Biological research is currently undergoing a revolution. With the advent of microarray technology the behavior of thousands of genes can be measured simultaneously. This capabilit...
Herman Midelfart, Henryk Jan Komorowski, Kristin N...