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BMCBI
2005
107views more  BMCBI 2005»
13 years 7 months ago
An edit script for taxonomic classifications
Abstract. Taxonomy provides one of the most powerful ways to navigate sequence data bases but currently, users are forced to formulate queries according to a single taxonomic class...
Roderic D. M. Page, Gabriel Valiente
BMCBI
2011
13 years 2 months ago
Flexible taxonomic assignment of ambiguous sequencing reads
Background: To characterize the diversity of bacterial populations in metagenomic studies, sequencing reads need to be accurately assigned to taxonomic units in a given reference ...
José Carlos Clemente, Jesper Jansson, Gabri...
BIOINFORMATICS
2010
127views more  BIOINFORMATICS 2010»
13 years 7 months ago
Analyzing taxonomic classification using extensible Markov models
Motivation: As next generation sequencing is rapidly adding new genomes, their correct placement in the taxonomy needs verification. However, the current methods for confirming cl...
Rao M. Kotamarti, Michael Hahsler, Douglas Raiford...
EKAW
2000
Springer
13 years 11 months ago
A Formal Ontology of Properties
A common problem of ontologies is that their taxonomic structure is often poor and confusing. This is typically exemplified by the unrestrained use of subsumption to accomplish a v...
Nicola Guarino, Christopher A. Welty
AAAI
2000
13 years 9 months ago
The Automatic Interpretation of Nominalizations
This paper discusses the interpretation of nominalizations in domain independent wide-coverage text. We present a statistical model which interprets nominalizations based on the c...
Maria Lapata