63 search results - page 5 / 13 » Generalized Composite Motif Discovery |
GECCO
2005
Springer
14 years 27 days ago
2005
Springer
Choosing the right representation for a problem is important. In this article we introduce a linear genetic programming approach for motif discovery in protein families, and we al...
BMCBI
2006
13 years 7 months ago
2006
Background: The identification of a consensus RNA motif often consists in finding a conserved secondary structure with minimum free energy in an ensemble of aligned sequences. How...
BMCBI
2010
13 years 7 months ago
2010
Background: One important goal of structural bioinformatics is to recognize and predict the interactions between protein binding sites and RNA. Recently, a comprehensive analysis ...
SPIRE
2005
Springer
14 years 26 days ago
2005
Springer
We consider the problem of finding pairs of short patterns such that, in a given input sequence of length n, the distance between each pair’s patterns is at least α. The proble...
KDD
2002
ACM
14 years 7 months ago
2002
ACM
In this paper we investigate the general problem of discovering recurrent patterns that are embedded in categorical sequences. An important real-world problem of this nature is mo...