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BMCBI
2006
142views more  BMCBI 2006»
15 years 2 months ago
Improving the Performance of SVM-RFE to Select Genes in Microarray Data
Background: Recursive Feature Elimination is a common and well-studied method for reducing the number of attributes used for further analysis or development of prediction models. ...
Yuanyuan Ding, Dawn Wilkins
BMCBI
2006
101views more  BMCBI 2006»
15 years 2 months ago
How repetitive are genomes?
Background: Genome sequences vary strongly in their repetitiveness and the causes for this are still debated. Here we propose a novel measure of genome repetitiveness, the index o...
Bernhard Haubold, Thomas Wiehe
SIGIR
2008
ACM
15 years 2 months ago
Topic-bridged PLSA for cross-domain text classification
In many Web applications, such as blog classification and newsgroup classification, labeled data are in short supply. It often happens that obtaining labeled data in a new domain ...
Gui-Rong Xue, Wenyuan Dai, Qiang Yang, Yong Yu
BMCBI
2005
97views more  BMCBI 2005»
15 years 2 months ago
Evolutionary distance estimation and fidelity of pair wise sequence alignment
Background: Evolutionary distances are a critical measure in comparative genomics and molecular evolutionary biology. A simulation study was used to examine the effect of alignmen...
Michael S. Rosenberg
147
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BMCBI
2005
97views more  BMCBI 2005»
15 years 2 months ago
Phylogenetic reconstruction of ancestral character states for gene expression and mRNA splicing data
Background: As genomes evolve after speciation, gene content, coding sequence, gene expression, and splicing all diverge with time from ancestors with close relatives. A minimum e...
Roald Rossnes, Ingvar Eidhammer, David A. Liberles