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BMCBI
2005
147views more  BMCBI 2005»
13 years 7 months ago
Calibration of mass spectrometric peptide mass fingerprint data without specific external or internal calibrants
Background: Peptide Mass Fingerprinting (PMF) is a widely used mass spectrometry (MS) method of analysis of proteins and peptides. It relies on the comparison between experimental...
Witold E. Wolski, Maciej Lalowski, Peter Jungblut,...
SODA
2004
ACM
111views Algorithms» more  SODA 2004»
13 years 9 months ago
Reconstructing strings from random traces
We are given a collection of m random subsequences (traces) of a string t of length n where each trace is obtained by deleting each bit in the string with probability q. Our goal ...
Tugkan Batu, Sampath Kannan, Sanjeev Khanna, Andre...
STOC
2005
ACM
129views Algorithms» more  STOC 2005»
14 years 8 months ago
Learning with attribute costs
We study an extension of the "standard" learning models to settings where observing the value of an attribute has an associated cost (which might be different for differ...
Haim Kaplan, Eyal Kushilevitz, Yishay Mansour
BMCBI
2008
122views more  BMCBI 2008»
13 years 7 months ago
Determining gene expression on a single pair of microarrays
Background: In microarray experiments the numbers of replicates are often limited due to factors such as cost, availability of sample or poor hybridization. There are currently fe...
Robert W. Reid, Anthony A. Fodor
BMCBI
2006
103views more  BMCBI 2006»
13 years 7 months ago
Domain-based small molecule binding site annotation
Background: Accurate small molecule binding site information for a protein can facilitate studies in drug docking, drug discovery and function prediction, but small molecule bindi...
Kevin A. Snyder, Howard J. Feldman, Michel Dumonti...