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ACL
2012
11 years 11 months ago
Learning to "Read Between the Lines" using Bayesian Logic Programs
Most information extraction (IE) systems identify facts that are explicitly stated in text. However, in natural language, some facts are implicit, and identifying them requires â€...
Sindhu Raghavan, Raymond J. Mooney, Hyeonseo Ku
BMCBI
2008
128views more  BMCBI 2008»
13 years 9 months ago
SIGffRid: A tool to search for sigma factor binding sites in bacterial genomes using comparative approach and biologically drive
Background: Many programs have been developed to identify transcription factor binding sites. However, most of them are not able to infer two-word motifs with variable spacer leng...
Fabrice Touzain, Sophie Schbath, Isabelle Debled-R...
FSTTCS
2010
Springer
13 years 6 months ago
The Complexity of Model Checking (Collapsible) Higher-Order Pushdown Systems
We study (collapsible) higher-order pushdown systems -- theoretically robust and well-studied models of higher-order programs -- along with their natural subclass called (collapsi...
Matthew Hague, Anthony Widjaja To
BMCBI
2006
145views more  BMCBI 2006»
13 years 9 months ago
GEM System: automatic prototyping of cell-wide metabolic pathway models from genomes
Background: Successful realization of a "systems biology" approach to analyzing cells is a grand challenge for our understanding of life. However, current modeling appro...
Kazuharu Arakawa, Yohei Yamada, Kosaku Shinoda, Yo...
FIMH
2011
Springer
13 years 19 days ago
Construction of Left Ventricle 3D Shape Atlas from Cardiac MRI
In this paper, we present an effective algorithm to construct a 3D shape atlas for the left ventricle of heart from cardiac Magnetic Resonance Image data. We derive a framework tha...
Shaoting Zhang, Mustafa Gökhan Uzunbas, Zhenn...