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BIOCOMP
2008
13 years 9 months ago
GIPSCo: A Method for Comparison of Protein Structures Based on Geometric Invariants
Protein structure comparison is important for elucidation of evolutionary relationships, function and functionally important amino acid residues. We propose Geometric Invariant bas...
Sandeep Deshmukh, Aniket Dalal, Pramod Wangikar
FASE
2005
Springer
14 years 1 months ago
Kaveri: Delivering the Indus Java Program Slicer to Eclipse
This tool paper describes a modular program slicer for Java built using the Indus program analysis framework along with it’s Eclipse-based user interface called Kaveri. Indus pro...
Ganeshan Jayaraman, Venkatesh Prasad Ranganath, Jo...
BIB
2007
101views more  BIB 2007»
13 years 7 months ago
Discovering and detecting transposable elements in genome sequences
The contribution of transposable elements (TEs) to genome structure and evolution as well as their impact on genome sequencing, assembly, annotation and alignment has generated in...
Casey M. Bergman, Hadi Quesneville
ALIFE
2007
13 years 7 months ago
Life Cycle of a Minimal Protocell - A Dissipative Particle Dynamics Study
Cross-reactions and other systematic difficulties generated by the coupling of functional chemical subsystems pose the largest challenge for assembling a viable protocell in the la...
Harold Fellermann, Steen Rasmussen, Hans-Joachim Z...
BMCBI
2006
195views more  BMCBI 2006»
13 years 7 months ago
CAFTAN: a tool for fast mapping, and quality assessment of cDNAs
Background: The German cDNA Consortium has been cloning full length cDNAs and continued with their exploitation in protein localization experiments and cellular assays. However, t...
Coral del Val, Vladimir Yurjevich Kuryshev, Karl-H...