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» Genescene: Biomedical Text And Data Mining
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KDD
2008
ACM
232views Data Mining» more  KDD 2008»
14 years 7 months ago
Anticipating annotations and emerging trends in biomedical literature
The BioJournalMonitor is a decision support system for the analysis of trends and topics in the biomedical literature. Its main goal is to identify potential diagnostic and therap...
Bernd Wachmann, Dmitriy Fradkin, Fabian Mörch...
BMCBI
2006
166views more  BMCBI 2006»
13 years 6 months ago
bioNMF: a versatile tool for non-negative matrix factorization in biology
Background: In the Bioinformatics field, a great deal of interest has been given to Non-negative matrix factorization technique (NMF), due to its capability of providing new insig...
Alberto D. Pascual-Montano, Pedro Carmona-Saez, Mo...
SIGIR
2009
ACM
14 years 1 months ago
A bayesian learning approach to promoting diversity in ranking for biomedical information retrieval
In this paper, we propose a Bayesian learning approach to promoting diversity for information retrieval in biomedicine and a re-ranking model to improve retrieval performance in t...
Xiangji Huang, Qinmin Hu
IWANN
2009
Springer
14 years 1 months ago
Identifying Gene Ontology Areas for Automated Enrichment
Biomedical ontologies provide a commonly accepted scheme for the characterization of biological concepts that enable knowledge sharing and integration. Updating and maintaining an ...
Catia Pesquita, Tiago Grego, Francisco M. Couto
BMCBI
2008
149views more  BMCBI 2008»
13 years 6 months ago
All-paths graph kernel for protein-protein interaction extraction with evaluation of cross-corpus learning
Background: Automated extraction of protein-protein interactions (PPI) is an important and widely studied task in biomedical text mining. We propose a graph kernel based approach ...
Antti Airola, Sampo Pyysalo, Jari Björne, Tap...