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CIKM
2006
Springer
14 years 12 hour ago
Validating associations in biological databases
To cope with the large amount of biological sequences being produced, a significant number of genes and proteins have been annotated by automated tools. A protein annotation is an...
Francisco M. Couto, Mário J. Silva, Pedro C...
BMCBI
2008
132views more  BMCBI 2008»
13 years 8 months ago
The SeqWord Genome Browser: an online tool for the identification and visualization of atypical regions of bacterial genomes thr
Background: Data mining in large DNA sequences is a major challenge in microbial genomics and bioinformatics. Oligonucleotide usage (OU) patterns provide a wealth of information f...
Hamilton Ganesan, Anna S. Rakitianskaia, Colin F. ...
CSDA
2008
128views more  CSDA 2008»
13 years 8 months ago
Classification tree analysis using TARGET
Tree models are valuable tools for predictive modeling and data mining. Traditional tree-growing methodologies such as CART are known to suffer from problems including greediness,...
J. Brian Gray, Guangzhe Fan
BMCBI
2006
127views more  BMCBI 2006»
13 years 8 months ago
Automatic discovery of cross-family sequence features associated with protein function
Background: Methods for predicting protein function directly from amino acid sequences are useful tools in the study of uncharacterised protein families and in comparative genomic...
Markus Brameier, Josien Haan, Andrea Krings, Rober...
BMCBI
2011
12 years 12 months ago
Computable visually observed phenotype ontological framework for plants
Background: The ability to search for and precisely compare similar phenotypic appearances within and across species has vast potential in plant science and genetic research. The ...
Jaturon Harnsomburana, Jason M. Green, Adrian S. B...