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» Genome Alignments Using MPI-LAGAN
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ECIR
2008
Springer
13 years 9 months ago
Effects of Aligned Corpus Quality and Size in Corpus-Based CLIR
Aligned corpora are often-used resources in CLIR systems. The three qualities of translation corpora that most dramatically affect the performance of a corpus-based CLIR system are...
Tuomas Talvensaari
BMCBI
2011
13 years 2 months ago
PileLine: a toolbox to handle genome position information in next-generation sequencing studies
Background: Genomic position (GP) files currently used in next-generation sequencing (NGS) studies are always difficult to manipulate due to their huge size and the lack of approp...
Daniel Glez-Peña, Gonzalo Gómez-L&oa...
NAR
2008
159views more  NAR 2008»
13 years 7 months ago
The UCSC Genome Browser Database: 2008 update
The University of California, Santa Cruz, Genome Browser Database (GBD) provides integrated sequence and annotation data for a large collection of vertebrate and model organism ge...
Donna Karolchik, Robert M. Kuhn, Robert Baertsch, ...
BMCBI
2005
97views more  BMCBI 2005»
13 years 7 months ago
Evolutionary distance estimation and fidelity of pair wise sequence alignment
Background: Evolutionary distances are a critical measure in comparative genomics and molecular evolutionary biology. A simulation study was used to examine the effect of alignmen...
Michael S. Rosenberg
BMCBI
2008
132views more  BMCBI 2008»
13 years 7 months ago
The Average Mutual Information Profile as a Genomic Signature
Background: Occult organizational structures in DNA sequences may hold the key to understanding functional and evolutionary aspects of the DNA molecule. Such structures can also p...
Mark Bauer, Sheldon M. Schuster, Khalid Sayood