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BIOINFORMATICS
2007
74views more  BIOINFORMATICS 2007»
13 years 10 months ago
Simultaneous alignment and annotation of cis-regulatory regions
Genomic transcriptional processes rely heavily on the combinatorial binding of transcription factors on the upstream regions of genes. Analysis and complete characterization of su...
Abha Singh Bais, Steffen Grossmann, Martin Vingron
NAR
2006
142views more  NAR 2006»
13 years 9 months ago
miRNAMap: genomic maps of microRNA genes and their target genes in mammalian genomes
Recent work has demonstrated that microRNAs (miRNAs) are involved in critical biological processes by suppressing the translation of coding genes. This work develops an integrated...
Paul Wei-Che Hsu, Hsien-Da Huang, Sheng-Da Hsu, Li...
NAR
2007
115views more  NAR 2007»
13 years 9 months ago
DroSpeGe: rapid access database for new Drosophila species genomes
The Drosophila species comparative genome database DroSpeGe (http://insects.eugenes.org/ DroSpeGe/) provides genome researchers with rapid, usable access to 12 new and old Drosoph...
Donald G. Gilbert
JBCB
2010
86views more  JBCB 2010»
13 years 8 months ago
Calbc Silver Standard Corpus
The production of gold standard corpora is time-consuming and costly. We propose an alternative: the ‚silver standard corpus‗ (SSC), a corpus that has been generated by the ha...
Dietrich Rebholz-Schuhmann, Antonio Jimeno-Yepes, ...
ISHPC
2003
Springer
14 years 3 months ago
Performance Study of a Whole Genome Comparison Tool on a Hyper-Threading Multiprocessor
We developed a multithreaded parallel implementation of a sequence alignment algorithm that is able to align whole genomes with reliable output and reasonable cost. This paper pres...
Juan del Cuvillo, Xinmin Tian, Guang R. Gao, Milin...