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BMCBI
2010
98views more  BMCBI 2010»
13 years 10 months ago
An optimized TOPS+ comparison method for enhanced TOPS models
nd: Although methods based on highly abstract descriptions of protein structures, such as VAST and TOPS, can perform very fast protein structure comparison, the results can lack a...
Mallika Veeramalai, David Gilbert, Gabriel Valient...
ESANN
2006
13 years 11 months ago
Sanger-driven MDSLocalize - a comparative study for genomic data
Multidimensional scaling (MDS) methods are designed to establish a one-to-one correspondence of input-output relationships. While the input may be given as high-dimensional data it...
Marc Strickert, Nese Sreenivasulu, Udo Seiffert
BMCBI
2010
155views more  BMCBI 2010»
13 years 7 months ago
BrEPS: a flexible and automatic protocol to compute enzyme-specific sequence profiles for functional annotation
Background: Models for the simulation of metabolic networks require the accurate prediction of enzyme function. Based on a genomic sequence, enzymatic functions of gene products a...
Constantin Bannert, A. Welfle, C. aus dem Spring, ...
NAR
2006
71views more  NAR 2006»
13 years 9 months ago
sgTarget: a target selection resource for structural genomics
sgTarget (http://www.ysbl.york.ac.uk/sgTarget) is a web-based resource to aid the selection and prioritization of candidate proteins for structure determination. The system annota...
Ana P. C. Rodrigues, Barry J. Grant, Roderick E. H...
DILS
2005
Springer
14 years 3 months ago
Setup and Annotation of Metabolomic Experiments by Integrating Biological and Mass Spectrometric Metadata
Unbiased metabolomic surveys are used for physiological, clinical and genomic studies to infer genotype-phenotype relationships. Long term reusability of metabolomic data needs bot...
Oliver Fiehn, Gert Wohlgemuth, Martin Scholz