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IPPS
2009
IEEE
14 years 3 months ago
Accelerating error correction in high-throughput short-read DNA sequencing data with CUDA
Emerging DNA sequencing technologies open up exciting new opportunities for genome sequencing by generating read data with a massive throughput. However, produced reads are signif...
Haixiang Shi, Bertil Schmidt, Weiguo Liu, Wolfgang...
BMCBI
2006
116views more  BMCBI 2006»
13 years 8 months ago
Gene annotation and network inference by phylogenetic profiling
Background: Phylogenetic analysis is emerging as one of the most informative computational methods for the annotation of genes and identification of evolutionary modules of functi...
Jie Wu, Zhenjun Hu, Charles DeLisi
CIBCB
2005
IEEE
14 years 2 months ago
Predicting Single Genes Related to Immune-Relevant Processes
— In this paper we address the problem of predicting gene activities by finding gene regulatory dependencies in experimental DNA microarray data. Only few approaches to infer th...
Christian Spieth, Felix Streichert, Nora Speer, Ch...
AAAI
2006
13 years 10 months ago
Efficient Haplotype Inference with Boolean Satisfiability
One of the main topics of research in genomics is determining the relevance of mutations, described in haplotype data, as causes of some genetic diseases. However, due to technolo...
Inês Lynce, João Marques-Silva
IJAIT
2008
107views more  IJAIT 2008»
13 years 8 months ago
Haplotype Inference with Boolean Satisfiability
One of the main topics of research in genomics is determining the relevance of mutations, described in haplotype data, as causes of some genetic diseases. However, due to technolo...
Inês Lynce, João Marques-Silva