Sciweavers

680 search results - page 80 / 136
» Genomic computing: explanatory modelling for functional geno...
Sort
View
BMCBI
2010
138views more  BMCBI 2010»
13 years 8 months ago
Sigma-2: Multiple sequence alignment of non-coding DNA via an evolutionary model
Background: While most multiple sequence alignment programs expect that all or most of their input is known to be homologous, and penalise insertions and deletions, this is not a ...
Gayathri Jayaraman, Rahul Siddharthan
EVOW
2010
Springer
14 years 1 months ago
A Genetic Algorithm to Minimize Chromatic Entropy
We present an algorithmic approach to solving the problem of chromatic entropy, a combinatorial optimization problem related to graph coloring. This problem is a component in algor...
Greg Durrett, Muriel Médard, Una-May O'Reil...
BMCBI
2005
201views more  BMCBI 2005»
13 years 8 months ago
Principal component analysis for predicting transcription-factor binding motifs from array-derived data
Background: The responses to interleukin 1 (IL-1) in human chondrocytes constitute a complex regulatory mechanism, where multiple transcription factors interact combinatorially to...
Yunlong Liu, Matthew P. Vincenti, Hiroki Yokota
ALMOB
2006
110views more  ALMOB 2006»
13 years 8 months ago
Computing distribution of scale independent motifs in biological sequences
The use of Chaos Game Representation (CGR) or its generalization, Universal Sequence Maps (USM), to describe the distribution of biological sequences has been found objectionable ...
Jonas S. Almeida, Susana Vinga
RECOMB
2005
Springer
14 years 9 months ago
Very Low Power to Detect Asymmetric Divergence of Duplicated Genes
Abstract. Asymmetric functional divergence of paralogues is a key aspect of the traditional model of evolution following duplication. If one gene continues to perform the ancestral...
Cathal Seoighe, Konrad Scheffler