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» Geometric Algorithms on CUDA
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PC
2010
177views Management» more  PC 2010»
13 years 5 months ago
Parallel graph component labelling with GPUs and CUDA
Graph component labelling, which is a subset of the general graph colouring problem, is a computationally expensive operation that is of importance in many applications and simula...
Kenneth A. Hawick, Arno Leist, Daniel P. Playne
AIPR
2008
IEEE
13 years 9 months ago
Low-cost, high-speed computer vision using NVIDIA's CUDA architecture
In this paper, we introduce real time image processing techniques using modern programmable Graphic Processing Units (GPU). GPUs are SIMD (Single Instruction, Multiple Data) device...
Seung In Park, Sean P. Ponce, Jing Huang, Yong Cao...
BMCBI
2011
13 years 2 months ago
DecGPU: distributed error correction on massively parallel graphics processing units using CUDA and MPI
Background: Next-generation sequencing technologies have led to the high-throughput production of sequence data (reads) at low cost. However, these reads are significantly shorter...
Yongchao Liu, Bertil Schmidt, Douglas L. Maskell
IPPS
2008
IEEE
14 years 1 months ago
Faster matrix-vector multiplication on GeForce 8800GTX
Recently a GPU has acquired programmability to perform general purpose computation fast by running ten thousands of threads concurrently. This paper presents a new algorithm for d...
N. Fujimoto
BMCBI
2008
211views more  BMCBI 2008»
13 years 7 months ago
CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
Svetlin Manavski, Giorgio Valle