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» Geometric Pattern Matching: A Performance Study
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BIRD
2008
Springer
221views Bioinformatics» more  BIRD 2008»
13 years 10 months ago
Comparison of Exact String Matching Algorithms for Biological Sequences
Exact matching of single patterns in DNA and amino acid sequences is studied. We performed an extensive experimental comparison of algorithms presented in the literature. In additi...
Petri Kalsi, Hannu Peltola, Jorma Tarhio
VLSISP
2008
140views more  VLSISP 2008»
13 years 8 months ago
Regular Expression Matching in Reconfigurable Hardware
In this paper we describe a regular expression pattern matching approach for reconfigurable hardware. Following a Non-deterministic Finite Automata direction, we introduce three ne...
Ioannis Sourdis, João Bispo, João M....
SIGGRAPH
2010
ACM
14 years 1 months ago
Geodesic patterns
Geodesic curves in surfaces are not only minimizers of distance, but they are also the curves of zero geodesic (sideways) curvature. It turns out that this property makes patterns...
Helmut Pottmann, Qixing Huang, Bailin Deng, Alexan...
DMIN
2008
158views Data Mining» more  DMIN 2008»
13 years 10 months ago
Mining User Movement Behavior Patterns in a Mobile Service Environment
Abstract - The rapid advances of wireless and web technologies enable the mobile users to request various kinds of services via mobile devices at anytime and anywhere. To provide t...
Yen-Ssu Chou, Tzung-Shi Chen
RECOMB
2005
Springer
14 years 9 months ago
Recognition of Binding Patterns Common to a Set of Protein Structures
We present a novel computational method, MultiBind, for recognition of binding patterns common to a set of protein structures. It is the first method which performs a multiple alig...
Maxim Shatsky, Alexandra Shulman-Peleg, Ruth Nussi...